10.6084/m9.figshare.3547203.v1
Bastien Mérigot
Bastien
Mérigot
Jean-Pierre Durbec
Jean-Pierre
Durbec
Jean-Claude Gaertner
Jean-Claude
Gaertner
Supplement 1. Simulated data sets of traits and initial and ultrametric distances used for Figs. 3 and 4.
Wiley
2016
clustering
matrix norm
functional diversity
functional classification
dendrogram
Environmental Science
Ecology
2016-08-09 03:14:47
Dataset
https://wiley.figshare.com/articles/dataset/Supplement_1_Simulated_data_sets_of_traits_and_initial_and_ultrametric_distances_used_for_Figs_3_and_4_/3547203
<h2>File List</h2><blockquote>
<p><a href="Fig.3&4_Data_Files.zip">Fig.3&4_Data_Files.zip</a> -- (all files at once) zip file containing simulated data sets (in
.txt files) of traits, initial and ultrametric distances used for Figures 3 and
Fig. 4.</p>
<p>Individual files: </p>
<blockquote>
<p><a href="Fig3_Data-Initial_Euclidean_distances_D.txt">Fig3_Data-Initial_Euclidean_distances_D.txt</a></p>
<p><a href="Fig3_Data-Species_traits.txt">Fig3_Data-Species_traits.txt</a></p>
<p><a href="Fig3_Data-Ultrametric_distances_U_Single_linkage.txt">Fig3_Data-Ultrametric_distances_U_Single_linkage.txt</a></p>
<p><a href="Fig3_Data-Ultrametric_distances_U'_UPGMA.txt">Fig3_Data-Ultrametric_distances_U'_UPGMA.txt</a></p>
<p><a href="Fig4_Data-Initial_Euclidean_distances_D.txt">Fig4_Data-Initial_Euclidean_distances_D.txt</a></p>
<p><a href="Fig4_Data-Species_traits.txt">Fig4_Data-Species_traits.txt</a></p>
<p><a href="Fig4_Data-Ultrametric_distances_U_Single_linkage.txt">Fig4_Data-Ultrametric_distances_U_Single_linkage.txt</a></p>
<p><a href="Fig4_Data-Ultrametric_distances_U'_UPGMA.txt">Fig4_Data-Ultrametric_distances_U'_UPGMA.txt</a></p>
</blockquote>
</blockquote><h2>Description</h2><blockquote>
<p>For both figures, the 5 species traits values to compute the simulated assemblages of 20 species were randomly sampled among a log-normal
distributions with mean 0 and standard deviation 1 (available in files Fig3_Data-Species_traits.txt and Fig4_Data-Species_traits.txt). Initial distances were computed by mean of the Euclidean distance (available in files Fig3_Data-Initial_Euclidean_distances_D.txt and Fig4_Data-Initial_Euclidean_distances_D.txt). Ultrametric distances were then provided by single linkage and UPGMA clustering algorithms (available in files Fig3_Data-Ultrametric_distances_U_Single_Linkage.txt, Fig3_Data-Ultrametric_distances_U'_UPGMA.txt, and Fig4_Data-Ultrametric_distances_U_Single_Linkage.txt, Fig4_Data-Ultrametric_distances_U'_UPGMA.txt).</p>
</blockquote>