Supplement 1. R code example for fitting the Mantel test, permutational multivariate analysis of variance, and constrained analysis of principal coordinates in the vegan package of R.
Kathryn M. Irvine
Eric C. Dinger
Daniel Sarr
10.6084/m9.figshare.3551964.v1
https://wiley.figshare.com/articles/dataset/Supplement_1_R_code_example_for_fitting_the_Mantel_test_permutational_multivariate_analysis_of_variance_and_constrained_analysis_of_principal_coordinates_in_the_vegan_package_of_R_/3551964
<h2>File List</h2><blockquote>
<a href="Supplement1_Rcode_ModelFit.txt">Supplement1_Rcode_ModelFit.txt</a>
</blockquote><h2>Description</h2><blockquote>
<p>R code for fitting the three dissimilarity-based models described in the paper: Mantel test, permutational multivariate analysis of variance (PerMANOVA), and constrained analysis of principal coordinates (CAP). R code utilizes the functions within the vegan package.</p>
</blockquote>
2016-08-09 10:57:57
presence–absence data
constrained analysis of principle coordinates
vegan R package
PerMANOVA
long-term monitoring
Bray-Curtis
Mantel test
Environmental Science
Ecology