10.6084/m9.figshare.3561990.v1 James T. Thorson James T. Thorson Hans J. Skaug Hans J. Skaug Kasper Kristensen Kasper Kristensen Andrew O. Shelton Andrew O. Shelton Eric J. Ward Eric J. Ward John H. Harms John H. Harms James A. Benante James A. Benante Supplement 1. Code necessary for replicating the simulation analysis included in this study. Wiley 2016 template model builder (TMB) spatial variation Gompertz model spatial modeling Pacific rockfish (Sebastes spp.) density dependence autoregressive model Gaussian random field integrated nested Laplace approximation (INLA) Environmental Science Ecology 2016-08-10 09:04:52 Dataset https://wiley.figshare.com/articles/dataset/Supplement_1_Code_necessary_for_replicating_the_simulation_analysis_included_in_this_study_/3561990 <h2>File List</h2><div> <p><a href="Sim_test--for_supplements.R">Sim_test--for_supplements.R</a> (MD5: 72de36cc9ed0d160bcc896f01b460289)</p> <p><a href="spacetime_v7d.CPP">spacetime_v7d.CPP</a> (MD5: 2d70d0c4c10f0424ac1bb6ae8c071acb)</p> <p><a href="time_v2d.CPP">time_v2d.CPP</a> (MD5: 6eb16d0e5808fed12ed12d1d11594e5d)</p> </div><h2>Description</h2><div> <p>Sim_test--for_supplements.R – File containing R script used to run simulation experiment comparing the estimation performance of the spatial and non-spatial Gompertz models.<br> spacetime_v7d.CPP – File containing the model specification for the spatial Gompertz model, implemented in Template Model Builder. <br> time_v2d.CPP – File containing the model specification for the nonspatial Gompertz model, implemented in Template Model Builder.</p> </div>