10.6084/m9.figshare.3561990.v1
James T. Thorson
James
T. Thorson
Hans J. Skaug
Hans
J. Skaug
Kasper Kristensen
Kasper
Kristensen
Andrew O. Shelton
Andrew O.
Shelton
Eric J. Ward
Eric
J. Ward
John H. Harms
John H.
Harms
James A. Benante
James A.
Benante
Supplement 1. Code necessary for replicating the simulation analysis included in this study.
Wiley
2016
template model builder (TMB)
spatial variation
Gompertz model
spatial modeling
Pacific rockfish (Sebastes spp.)
density dependence
autoregressive model
Gaussian random field
integrated nested Laplace approximation (INLA)
Environmental Science
Ecology
2016-08-10 09:04:52
Dataset
https://wiley.figshare.com/articles/dataset/Supplement_1_Code_necessary_for_replicating_the_simulation_analysis_included_in_this_study_/3561990
<h2>File List</h2><div>
<p><a href="Sim_test--for_supplements.R">Sim_test--for_supplements.R</a> (MD5: 72de36cc9ed0d160bcc896f01b460289)</p>
<p><a href="spacetime_v7d.CPP">spacetime_v7d.CPP</a> (MD5: 2d70d0c4c10f0424ac1bb6ae8c071acb)</p>
<p><a href="time_v2d.CPP">time_v2d.CPP</a> (MD5: 6eb16d0e5808fed12ed12d1d11594e5d)</p>
</div><h2>Description</h2><div>
<p>Sim_test--for_supplements.R – File containing R script used to run simulation experiment comparing the estimation performance of the spatial and non-spatial Gompertz models.<br>
spacetime_v7d.CPP – File containing the model specification for the spatial Gompertz model, implemented in Template Model Builder. <br>
time_v2d.CPP – File containing the model specification for the nonspatial Gompertz model, implemented in Template Model Builder.</p>
</div>