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Supplement 1. MATLAB code for the ecological and macroevolutionary simulation models and general R code to calculate spatial and nonspatial phylogenetic diversity–area curves.

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posted on 2016-08-09, 13:08 authored by Matthew R. Helmus, Anthony R. Ives

File List

Helmus_PDAC_Matlab.m

Helmus_PDAC_R.r

Description

The matlab code generates all of the ecological and macroevolutionary simulations models presented in the results. The R code calculates spatial and nonspatial phylogenetic diversity area curves for community/sample/plot data sets. The R code is general so that it should work on most data sets.

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