Scripts and multi-colony Atlantic Puffin data for running the mixed model for survival at the multi-population scale.
Ecological Archives E090-208-S1.
Authors
File list (downloads)
Description
Vladimir Grosbois
CIRAD
UR AGIRs- Animal et Gestion Intégrée des Risques
TA C 22/E Campus International Baillarguet
34398 Montpellier Cedex 5, France
E-mail: vladimirgrosbois@hotmail.comOlivier Gimenez
Centre d'Ecologie Fonctionnelle et Evolutive – CNRS – UMR 5175
1919 Route de Mende, 34293 Montpellier Cedex 5 – France
E-mail: olivier.gimenez@cefe.cnrs.fr
marrayp1_Fair.dat - M-arrays for the first trap-dependence age class in Fair Isle
marrayp1_May.dat - M-arrays for the first trap-dependence age class in Isle of May
marrayp1_Rost.dat - M-arrays for the first trap-dependence age class in Røst
marrayp1_Skomer.dat - M-arrays for the first trap-dependence age class in Skomer
marrayp2_Fair.dat - M-arrays for the second trap-dependence age class in Fair Isle
marrayp2_May.dat - M-arrays for the second trap-dependence age class in Isle of May
marrayp2_Rost.dat - M-arrays for the second trap-dependence age class in Røst
marrayp2_Skomer.dat - M-arrays for the second trap-dependence age class in Skomer
SST.dat - covariate values = sea surface temperature in the vicinity of the breeding colonies
multipoppuffins.R - R script which reads in the data and calls WinBUGS
multipoppuffins.bug - The WinBUGS script which runs the model with sea surface temperature (SST) as a covariate and both global- and local-scale variances
multipoppuffins.zip - All files at once
All the .dat files are text files containing the data, in the form of M-arrays, described and analyzed in the original paper; multipoppuffins.R and multipoppuffins.bug are the scripts with which the model described in the original paper and in Appendix A can be built and fitted to these data.
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